[HTML][HTML] Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes

…, B Poppe, N Van Roy, A De Paepe, F Speleman - Genome biology, 2002 - Springer
Background Gene-expression analysis is increasingly important in biological research, with
real-time reverse transcription PCR (RT-PCR) becoming the method of choice for high …

[HTML][HTML] Guidelines for molecular karyotyping in constitutional genetic diagnosis

…, J Schoumans, R Ciccone, F Speleman… - European Journal of …, 2007 - nature.com
Array-based whole genome investigation or molecular karyotyping enables the genome-
wide detection of submicroscopic imbalances. Proof-of-principle experiments have …

[HTML][HTML] Novel biological insights in T-cell acute lymphoblastic leukemia

…, B De Moerloose, Y Benoit, J Haigh, F Speleman… - Experimental …, 2015 - Elsevier
T-cell acute lymphoblastic leukemia (T-ALL) is an aggressive type of blood cancer that
accounts for about 15% of pediatric and 25% of adult acute lymphoblastic leukemia (ALL) …

The H3K27me3 demethylase UTX in normal development and disease

J Van der Meulen, F Speleman, P Van Vlierberghe - Epigenetics, 2014 - Taylor & Francis
In 2007, the Ubiquitously Transcribed Tetratricopeptide Repeat on chromosome X (UTX)
was identified as a histone demethylase that specifically targets di-and tri-methyl groups on …

miR-9, a MYC/MYCN-activated microRNA, regulates E-cadherin and cancer metastasis

…, S Valastyan, F Westermann, F Speleman… - Nature cell …, 2010 - nature.com
MicroRNAs (miRNAs) are increasingly implicated in regulating the malignant progression of
cancer. Here we show that miR-9, which is upregulated in breast cancer cells, directly …

[HTML][HTML] qBase relative quantification framework and software for management and automated analysis of real-time quantitative PCR data

J Hellemans, G Mortier, A De Paepe, F Speleman… - Genome biology, 2007 - Springer
Although quantitative PCR (qPCR) is becoming the method of choice for expression profiling
of selected genes, accurate and straightforward processing of the raw measurements …

Identification of ALK as a major familial neuroblastoma predisposition gene

…, R Sennett, JE Lynch, P Perri, G Laureys, F Speleman… - Nature, 2008 - nature.com
Neuroblastoma is a childhood cancer that can be inherited, but the genetic aetiology is
largely unknown. Here we show that germline mutations in the anaplastic lymphoma kinase …

[HTML][HTML] A novel and universal method for microRNA RT-qPCR data normalization

…, A De Weer, D Muth, F Westermann, F Speleman… - Genome biology, 2009 - Springer
Gene expression analysis of microRNA molecules is becoming increasingly important. In
this study we assess the use of the mean expression value of all expressed microRNAs in a …

Loss-of-function mutations in FGFR1 cause autosomal dominant Kallmann syndrome

…, D Le Tessier, C Cruaud, M Delpech, F Speleman… - Nature …, 2003 - nature.com
We took advantage of overlapping interstitial deletions at chromosome 8p11–p12 in two
individuals with contiguous gene syndromes and defined an interval of roughly 540 kb …

[HTML][HTML] Recurrent rearrangements of chromosome 1q21. 1 and variable pediatric phenotypes

…, L Goossens, G Mortier, F Speleman… - … England Journal of …, 2008 - Mass Medical Soc
Background Duplications and deletions in the human genome can cause disease or
predispose persons to disease. Advances in technologies to detect these changes allow for …