DGGE screening of PKD1 gene reveals novel mutations in a large cohort of 146 unrelated patients

Hum Genet. 1999 Sep;105(3):231-9. doi: 10.1007/s004390051094.

Abstract

Autosomal dominant polycystic kidney disease (ADPKD) is one of the most commonly inherited renal diseases. ADPKD is a genetically heterogeneous disorder involving at least three different genes. PKD1, the major locus mapped to chromosome 16p13.3 accounts for approximately 85% of ADPKD cases. The search for mutations is a very important step in understanding the molecular mechanisms underlying ADPKD. Despite intense screening by many groups, only a small number of mutations have been described so far. We undertook the first study using denaturing gradient gel electrophoresis (DGGE) to scan for mutations in the non-duplicated region of the PKD1 gene in a large cohort of 146 French unrelated ADPKD patients. We successfully identified novel mutations: 3 are frameshift mutations, 2 nonsense mutations, 2 missense mutations, 1 is an insertion in the frame of 9 nucleotides, 3 intronic variations and several polymorphisms. One of these mutations is the fourth de novo mutation described in this gene. We also describe a family with possible clinical anticipation. DGGE is an effective method for detecting nucleotide changes in the PKD1 gene.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Aged, 80 and over
  • Amino Acid Substitution
  • Base Sequence
  • DNA / chemistry
  • DNA / genetics
  • DNA Mutational Analysis
  • Electrophoresis, Polyacrylamide Gel
  • Female
  • Frameshift Mutation
  • France
  • Genetic Testing
  • Humans
  • Male
  • Middle Aged
  • Mutagenesis, Insertional
  • Polycystic Kidney, Autosomal Dominant / genetics*
  • Polymorphism, Genetic
  • Proteins / genetics*
  • TRPP Cation Channels

Substances

  • Proteins
  • TRPP Cation Channels
  • polycystic kidney disease 1 protein
  • DNA