Abstract
The p16-Leiden germline variant in the CDKN2A gene is associated with a high risk of melanoma and pancreatic cancer. The aims of this study were to assess the risk of developing other cancers and to determine whether tobacco use would alter cancer risk in carriers of such a variant. We therefore prospectively evaluated individuals with a p16-Leiden germline variant, participating in a pancreatic surveillance programme, for the occurrence of cancer (n=150). Tobacco use was assessed at the start of the surveillance programme. We found a significantly increased risk for melanoma (relative risk (RR) 41.3; 95% confidence interval (CI) 22.9–74.6) and pancreatic cancer (RR 80.8; 95% CI 44.7–146). In addition, increased risks were found for cancers of the lip, mouth and pharynx (RR 18.8; 95% CI 6.05–58.2) and respiratory tumours (RR 4.56; 95% CI 1.71–12.1). Current smokers developed significantly more cancers of the lip, mouth and pharynx, respiratory system and pancreas compared with former and never-smokers. In conclusion, this study shows that carriers of a p16-Leiden variant have an increased risk of developing various types of cancer, and smoking significantly increases the risk of frequently occurring cancers. Smoking cessation should be an integral part of the management of p16-Leiden variant carriers.
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Introduction
Familial atypical multiple mole melanoma (FAMMM) syndrome is an autosomal dominant tumour syndrome characterized by the development of melanoma and dysplastic naevi of the skin. Up to 40% of FAMMM families harbour a germline variant in the CDKN2A gene, making it the most frequently involved gene in FAMMM syndrome.1 More than 65 different variants in the CDKN2A gene have been identified worldwide.2 In the Netherlands, the p16-Leiden variant, a 19-base-pair deletion (c.225_243del19; RefSeq NM_000077.4), is the most common CDKN2A germline variant.3 In a previous study,4 we demonstrated that carriers of such a variant have an increased risk of developing pancreatic cancer (15–20% lifetime risk). Since then a large cohort of patients is under pancreatic surveillance.5
Several studies reported an increased risk of tumours other than melanoma and pancreatic cancers for various CDKN2A germline variants.6, 7, 8, 9, 10 However, these studies have used a variety of methodological approaches and some have been limited by inclusion of heterogeneous groups or by failure to determine individual mutation status. In addition, the influence of environmental factors (for example, smoking) on the phenotypic variability in FAMMM syndrome is yet to be elucidated.
In the present study, we analysed the prospective risk of cancer in a unique cohort of individuals with the same CDKN2A germline variant (p16-Leiden). In addition, we examined the association between a personal history of smoking and the development of cancer.
Patients and methods
Patient cohort
Individuals were included in this study on the basis of carrier status for the p16-Leiden germline variant and participation in a pancreatic surveillance programme, which consisted of a yearly abdominal MRI combined with magnetic resonance cholangiopancreatography from the age of 45.5
A complete medical history was obtained at the start of the surveillance study. Following this first visit, patients revisited the gastroenterologist annually, at which point the occurrence of new cancers or other diseases was assessed. For the current study, all medical records (with pathological confirmation) were obtained for each individual from the electronic hospital information system. Only cancers that occurred after the first contact were included in the analysis. The study inclusion and follow-up period was from January 2000 to April 2013. The follow-up time for each individual started from inclusion until the last documented appointment with a medical specialist at the Leiden University Medical Center, or the date of death.
Cancer risk estimates and statistical analysis
The prospectively observed cancers were classified by the International Classification of Diseases code 10 (ICD-10). To calculate the expected number of cancers, 5-year cancer incidence rates of matching ICD codes, specific for sex and age, were obtained from the Netherlands Cancer Registry for the province of South-Holland in the Netherlands.11 To calculate the expected number of neuroendocrine tumours, national incidence rates were used for the period 2001–2010.12 The relative risks (RRs) were computed by dividing the observed cancer numbers into each group by the expected cancer numbers. Confidence intervals (CIs) for the RRs were calculated with the use of Poisson probabilities. To compute the impact of tobacco use on cancer development, individuals were classified as either ever-smokers (current or former) or never-smokers at inclusion in the study; χ2 analysis was used for comparison. Acquired data were submitted to a public CDKN2A gene variant database (http://chromium.liacs.nl/LOVD2/home.php; submission ID no. 0014954).
Results
Patient characteristics
A total of 150 proven or implied carriers of the p16-Leiden germline variant were included (64 males, median age at inclusion 51 years (range, 36–72 years)). One hundred and forty-four individuals had a proven p16-Leiden germline variant, including a homozygote for the p16-Leiden variant. The remaining six individuals had at least one melanoma in their medical history and a close relative with the p16-Leiden germline variant, which makes them highly likely of being a carrier (>97% according to Bayesian probabilities). The median time of follow-up was 43 months (range, 1–144 months; first to third quartiles, 17–89 months). The total observation period was 682 person years.
Prospective tumours
A total of 47 prospective tumours were diagnosed in 36 (24%) of the 150 individuals. Owing to the relatively small numbers of observed cancers, classification was based on organ system rather than individual site, with the exceptions of melanoma and pancreatic cancer. Table 1 shows the RRs for developing various types of cancer. Melanoma and pancreatic cancers were the most frequently occurring ones (n=11 each, RR 41.3 (95% CI 22.9–74.6) and 80.8 (95% CI 44.7–146), respectively). When these tumours were excluded from the analysis, the risk of developing any type of cancer remained significantly increased (RR 4.31; 95% CI 2.91–6.37). The highest risks were found for cancers of the lip, mouth and pharynx (RR 18.8; 95% CI 6.05–58.2), respiratory tumours (RR 4.56; 95% CI 1.71–12.1) and digestive tract tumours (RR 3.71; 95% CI 1.39–9.90). The relatively small numbers of observed cancers, however, resulted in broad CIs, which is especially true for cancers of the bone and soft tissue.
Details of 21 prospective cancers (all cancers except those of skin and pancreas) are shown in Table 2. Notably, the observed number of carcinoid tumours was higher than expected (0.0168; RR 119; 95% CI 29.7–475). When excluding carcinoid tumours from the risk calculation for digestive tract tumours, the increased risk for a digestive tract tumour no longer reached significance (RR 1.86; 95% CI 0.465–7.43).
Seven individuals developed a total of 11 melanomas during the follow-up period. However, a much larger number of individuals (91 out of 150) had a diagnosed melanoma before starting surveillance for pancreatic cancer (median age at diagnosis of first melanoma 40 years). Table 3 shows tumours diagnosed before inclusion, of which melanoma forms by far the major part. Only one individual developed a first melanoma during the follow-up period. Melanoma therefore remains the most frequently occurring cancer in this p16-Leiden study cohort and first melanomas mostly occur before the age of inclusion (45 years). A more exhaustive description of the melanoma phenotype in carriers of the p16-Leiden germline variant is given by van der Rhee et al.13
Tobacco use
With regard to a personal history of smoking, information was complete for 147 (98%) out of 150 individuals. At inclusion, 92 individuals were ever-smokers (of which 26 were current smokers). Eleven of the 92 ever-smokers (12%) and 4 of 55 never-smokers (7%) developed pancreatic cancer, respiratory cancer or cancer of the lip, mouth and pharynx (P=0.364). Four of the eleven patients with pancreatic cancer were never-smokers. When only current smokers were considered, 7 of 26 (27%) developed the above mentioned cancers, versus only 8 of 121 (7%) of the former and never-smokers. Therefore, current smokers in our cohort have a fourfold increased risk of developing these types of cancer when compared with former and never-smokers (P=0.002).
Chronic diseases
We also evaluated the occurrence of other (chronic) diseases. We found that 6 out of 150 individuals (4%) had a medical history of sarcoidosis, which is much higher than expected (estimated prevalence in Europe is ~15–20 per 100 000 individuals).14 There was no kinship between these individuals.
Causes of death
Eighteen of the 150 individuals died during follow-up (median age of death was 62 years (range, 49–78 years)). Seventeen individuals died from cancer; seven from pancreatic cancer (median age 59 years) and four from melanoma (median age 61 years).
Discussion
This prospective study analysed the risk of cancers in a cohort of homogeneous CDKN2A variant carriers (p16-Leiden). A significantly increased risk of both melanoma and pancreatic cancers was found. However, when excluding these cancers from the risk calculation, a marked increased risk for developing any cancer (RR 4.31; 95% CI 2.91–6.37) remained. Most notable were the increased risk of respiratory and lip, mouth and pharynx cancers, and the relatively frequent occurrence of carcinoid tumours. Being a current smoker at the start of surveillance was significantly associated with the development of tumours of the pancreas, respiratory tract and head and neck regions. In addition, we found an association between the p16-Leiden variant and sarcoidosis.
Without considering melanoma and pancreatic cancer, tumours of the respiratory tract (including laryngeal tumours) and of the lip, mouth and pharynx were the most frequently occurring tumours in our cohort. A previous retrospective study by de Snoo et al.6 also found significantly increased risks for these tumours in a cohort of p16-Leiden variant carriers. Oldenburg et al.15 described a p16-Leiden variant-positive family in which many relatives had developed lung cancer and head and neck tumours. Several other case reports have also described the occurrence of head and neck tumours in CDKN2A variant-positive families.16,17 In sum, it seems that tumours of the head and neck and the respiratory tract are part of the spectrum of cancers occurring in CDKN2A variant-positive FAMMM families.
Two interesting observations were the relatively frequent occurrence of carcinoid tumours and sarcoidosis in unrelated variant carriers in our cohort. Both have not been previously reported in carriers of a CDKN2A variant. Although only two individuals developed a carcinoid tumour during follow-up, another individual had a medical history of carcinoid. It has been shown that CDKN2A inactivation has a role in the pathogenesis of sporadic neuroendocrine tumours, as a substantial amount of these tumours show loss of p16 protein expression,18 and also promoter methylation of the CDKN2A gene is frequently found.19 Further studies are needed to confirm the possible association between a CDKN2A germline variant and carcinoid tumours or sarcoidosis.
Our current study has several strengths. Owing to its prospective design, patient participation was not influenced by the occurrence of tumours. In addition, because of the yearly follow-up at the outpatient Department of Gastroenterology, it is unlikely that cancers and other important medical information were missed. Another strength is the homogeneity of the cohort; all individuals have the same CDKN2A germline variant. An important limitation was, however, the relatively high age of inclusion of individuals (median age 51 years), which was because of the threshold of 45 years of age for inclusion in the pancreatic surveillance programme. Tumours generally occurring before this age were therefore not included in the calculations, which is reflected by the observation of a high incidence of melanoma before start of the surveillance programme. As the number of participants and observed cancers was relatively small, risk factor analysis for each cancer separately could not be carried out.
Pancreatic cancer is the leading cause of death in our cohort. Pancreatic cancer surveillance may improve survival, as most tumours are detected in a resectable stage.5 In view of the increased risk of head and neck tumours (including tumours of the larynx), patients should be advised to contact their doctor if they have complaints of hoarseness, dysphagia or ulcers in the mouth or throat. A low threshold for reference to an otolaryngologist should be advocated. A surveillance programme for tumours of the head and neck regions should possibly be considered in the future, which could simply consist of yearly inspection of the mouth and throat. The clear relation of many of the frequently occurring cancers in our cohort to smoking indicates that active intervention to quit smoking is of the utmost importance in this group.
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Acknowledgements
We would like to thank Dr R Wolterbeek for statistical support. This research was supported by the ZOLEON foundation (no. 12.09 to HFAV).
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Potjer, T., Kranenburg, H., Bergman, W. et al. Prospective risk of cancer and the influence of tobacco use in carriers of the p16-Leiden germline variant. Eur J Hum Genet 23, 711–714 (2015). https://doi.org/10.1038/ejhg.2014.187
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DOI: https://doi.org/10.1038/ejhg.2014.187
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