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Detection of low-level somatic and germline mosaicism by denaturing high-performance liquid chromatography in a EURO-MRX family with SLC6A8 deficiency

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Abstract

Creatine transporter deficiency is an X-linked mental retardation disorder caused by mutations in the creatine transporter gene, SLC6A8. In a European Mental Retardation Consortium panel of 66 patients, we identified a male with mental retardation, caused by a c.1059_1061delCTT; p.Phe354del mutation in the SLC6A8 gene. With the use of direct DNA sequencing, the mutation was also found in the brother of the proband, but not in their mother. However, by analyzing EDTA blood of the mother with denaturing high-performance liquid chromatography (DHPLC), we could show that the mother displays low-level somatic mosaicism for the three base-pair deletion. This study indicates DHPLC as an important tool in the detection of low-level mosaicism, as does it illustrate the importance of considering somatic and germline mosaicism in the case of apparent de novo mutation.

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References

  1. Almeida LS, Verhoeven NM, Roos B, Valongo C, Cardoso ML, Vilarinho L, Salomons GS, Jakobs C (2004) Creatine and guanidinoacetate: diagnostic markers for inborn errors in creatine biosynthesis and transport. Mol Genet Metab 82:214–219

    Article  CAS  PubMed  Google Scholar 

  2. Cecil KM, Salomons GS, Ball WS Jr, Wong B, Chuck G, Verhoeven NM, Jakobs C, Degrauw TJ (2001) Irreversible brain creatine deficiency with elevated serum and urine creatine: a creatine transporter defect? Ann Neurol 49:401–404

    Article  CAS  PubMed  Google Scholar 

  3. Gleeson JG, Minnerath S, Kuzniecky RI, Dobyns WB, Young ID, Ross ME, Walsh CA (2000) Somatic and germline mosaic mutations in the doublecortin gene are associated with variable phenotypes. Am J Hum Genet 67:574–581

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  4. Kleefstra T, Rosenberg EH, Salomons GS, Stroink H, van BH, Hamel BC, de Vries BB (2005) Progressive intestinal, neurological and psychiatric problems in two adult males with cerebral creatine deficiency caused by an SLC6A8 mutation. Clin Genet 68:379–381

    Article  CAS  PubMed  Google Scholar 

  5. Lion-Francois L, Cheillan D, Pitelet G, cquaviva-Bourdain C, Bussy G, Cotton F, Guibaud L, Gerard D, Rivier C, Vianey-Saban C, Jakobs C, Salomons GS, des Portes V (2006) High frequency of creatine deficiency syndromes in patients with unexplained mental retardation. Neurology 67:1713–1714

    Article  CAS  PubMed  Google Scholar 

  6. Meierhofer D, Mayr JA, Ebner S, Sperl W, Kofler B (2005) Rapid screening of the entire mitochondrial DNA for low-level heteroplasmic mutations. Mitochondrion 5:282–296

    Article  CAS  PubMed  Google Scholar 

  7. Newton CR, Graham A, Heptinstall LE, Powell SJ, Summers C, Kalsheker N, Smith JC, Markham AF (1989) Analysis of any point mutation in DNA. The amplification refractory mutation system (ARMS). Nucleic Acids Res 17:2503–2516

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  8. Poirier K, Abriol J, Souville I, Laroche-Raynaud C, Beldjord C, Gilbert B, Chelly J, Bienvenu T (2005) Maternal mosaicism for mutations in the ARX gene in a family with X-linked mental retardation. Hum Genet 118:45–48

    Article  CAS  Google Scholar 

  9. Pouwels PJ, Brockmann K, Kruse B, Wilken B, Wick M, Hanefeld F, Frahm J (1999) Regional age dependence of human brain metabolites from infancy to adulthood as detected by quantitative localized proton MRS. Pediatr Res 46:474–485

    Article  CAS  PubMed  Google Scholar 

  10. Provencher SW (1993) Estimation of metabolite concentrations from localized in vivo proton NMR spectra. Magn Reson Med 30:672–679

    Article  CAS  PubMed  Google Scholar 

  11. Rosenberg EH, Almeida LS, Kleefstra T, deGrauw RS, Yntema HG, Bahi N, Moraine C, Ropers HH, Fryns JP, Degrauw TJ, Jakobs C, Salomons GS (2004) High prevalence of SLC6A8 deficiency in X-linked mental retardation. Am J Hum Genet 75:97–105

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  12. Rosenberg EH, Martinez MC, Betsalel OT, van Dooren SJ, Fernandez M, Jakobs C, Degrauw TJ, Kleefstra T, Schwartz CE, Salomons GS (2007) Functional characterization of missense variants in the creatine transporter gene (SLC6A8): improved diagnostic application. Hum Mutat 28:890–896

    Google Scholar 

  13. Salomons GS, van Dooren SJ, Verhoeven NM, Cecil KM, Ball WS, Degrauw TJ, Jakobs C (2001) X-linked creatine-transporter gene (SLC6A8) defect: a new creatine-deficiency syndrome. Am J Hum Genet 68:1497–1500

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  14. Struys EA, Jansen EE, Ten Brink HJ, Verhoeven NM, van der Knaap MS, Jakobs C (1998) An accurate stable isotope dilution gas chromatographic-mass spectrometric approach to the diagnosis of guanidinoacetate methyltransferase deficiency. J Pharm Biomed Anal 18:659–665

    Article  CAS  PubMed  Google Scholar 

  15. van der Knaap MS, Wevers RA, Struys EA, Verhoeven NM, Pouwels PJ, Engelke UF, Feikema W, Valk J, Jakobs C (1999) Leukoencephalopathy associated with a disturbance in the metabolism of polyols. Ann Neurol 46:925–928

    Article  PubMed  Google Scholar 

  16. Vulliamy TJ, Knight SW, Heiss NS, Smith OP, Poustka A, Dokal I, Mason PJ (1999) Dyskeratosis congenita caused by a 3′ deletion: germline and somatic mosaicism in a female carrier. Blood 94:1254–1260

    CAS  PubMed  Google Scholar 

  17. West M, Park D, Dodd JR, Kistler J, Christie DL (2005) Purification and characterization of the creatine transporter expressed at high levels in HEK293 cells. Protein Expr Purif 41:393–401

    Article  CAS  PubMed  Google Scholar 

  18. Wolford JK, Blunt D, Ballecer C, Prochazka M (2000) High-throughput SNP detection by using DNA pooling and denaturing high performance liquid chromatography (DHPLC). Hum Genet 107:483–487

    Article  CAS  PubMed  Google Scholar 

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Acknowledgments

We thank Patricia S Darmin for her assistance with DHPLC optimization and Lorna Landegge-Pope, Donald E and Karin L Brass for their excellent reviewing. The work of Ofir T Betsalel, Cristina Martínez-Muñoz, Efraim H. Rosenberg, and Gajja S Salomons is supported by the Dutch society for Scientific Research (ZonMW/NWO), VIDI grant number 917.56.349, and that of Arjan PM de Brouwer and Ben CJ Hamel by the European Union grant QLG3-CT-2002-01819 EURO-MRX.

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Correspondence to Gajja S. Salomons.

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Betsalel, O.T., van de Kamp, J.M., Martínez-Muñoz, C. et al. Detection of low-level somatic and germline mosaicism by denaturing high-performance liquid chromatography in a EURO-MRX family with SLC6A8 deficiency. Neurogenetics 9, 183–190 (2008). https://doi.org/10.1007/s10048-008-0125-5

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