Gene | Chr (position) | L | M_s | M_st | M_p | New.SB_p | New.STB_p | Adjusted p value |
LOC283685 | 15 (23684612–23685207) | 21 | 7 | 7 | 7 | 2.34E-06 | 2.34E-06 | 7.41E-06 |
OR4C45 | 11 (48366903–48373999) | 14 | 9 | 9 | 9 | 7.72E-06 | 7.72E-06 | 2.18E-05 |
KCNJ12 | 17 (21279699–21323179) | 178 | 36 | 36 | 35.5 | 9.63E-06 | 9.63E-06 | 2.67E-05 |
PSMD2 | 3 (184017022–184026675) | 74 | 6 | 6 | 6 | 5.65E-05 | 5.65E-05 | 1.32E-04 |
BX648489 | 20 (25825303–25834657) | 18 | 10 | 10 | 10 | 6.34E-05 | 6.34E-05 | 1.47E-04 |
ANKFY1 | 17 (4066665–4167025) | 71 | 8 | 8 | 8 | 6.79E-05 | 8.15E-05 | 1.84E-04 |
FRG1B | 20 (29612306–29631629) | 50 | 14 | 14 | 14 | 9.94E-05 | 9.94E-05 | 2.21E-04 |
LRRTM4 | 2 (76974850–77749502) | 47 | 5 | 5 | 5 | 1.06E-04 | 1.06E-04 | 2.34E-04 |
MLLT10P1 | 20 (29637584–29638138) | 21 | 20 | 20 | 20 | 1.41E-04 | 1.41E-04 | 3.03E-04 |
ADCY1 | 7 (45613739–45703971) | 30 | 1 | 1 | 1 | 1.81E-04 | 1.81E-04 | 3.80E-04 |
Adjusted p value, p value after applying genomic control correction (inflation factor λ=1.11) to the New.STP_p χ2 test statistic; L, number of variant sites that are considered ‘rare’ (alternate allele read count frequency AACF <0.05); M_p, estimated number of SNVs in the dataset; M_s, number of variant sites screened in; M_st, number of variant sites screened in and passing threshold AACF >1/(2n), where n=128+248 (the cohort size); New.SB_p, p value of the ‘New-SB’ test (based on M_s); New.STP_p, p value of the ‘New-STB’ test (based on M_st).