Table 1

Chromosomal fragments involved in the rearrangement

Chromosome	Fragment	Fragment position (hg38)		Size (bp)	Genes affected	Putative function
		Start	End
chr 5	A	110 310 618	111 651 619	1 341 001	STARD4-AS1; NR_040093.1	Lnc-RNA
	B	111 651 620	111 758 049	106 429	STARD4-AS1; NR_040093.1
	C	111 758 050	112 157 589	399 539	NREP; NM_004772.4	Neuronal function, cell migration
	D	112 157 590	112 158 504	914
	E	112 158 505	112 164 089	5584	EPB41L4A; NM_022140.5	Cytoskeleton–membrane interaction
	F	112 164 090	112 169 857	5767	EPB41L4A; NM_022140.5
	G	112 169 858	112 428 316	258 458	EPB41L4A; NM_022140.5
	H	112 428 345	112 714 041	285 696	APC; NM_000038.6	WNT/b-catenin signalling, tumour suppressor
	I	112 714 051	113 035 528	321 477	APC; NM_000038.6
	J	113 035 607	113 417 732	382 125	MCC; NM_001085377.2	WNT/b-catenin signalling, tumour suppressor
	K	113 417 733	113 426 167	8434	MCC; NM_001085377.2
	L	113 426 215	113 429 671	3456	MCC; NM_001085377.2
	M	113 429 662	113 851 075	421 413	MCC; NM_001085377.2
	N	113 851 076	114 192 054	340 978	KCNN2; NM_021614.4	Potassium channel
chr 10	Insertion site	67 598 332	67 598 333		CTNNA3; NM_013266.4	Cell–cell adhesion, b-catenin binding