Haplotype diversity analysis of absorption, distribution, metabolism and excretion genes. Shown here are genes with at least three functional SNPs defined by PharmaGKB
Gene | Number of SNPs | Hd_CHB | Hd_HUI | Hd_KGZ | Hd_KZK | Hd_UIG | Hd_TJK | Hd_CEU | p Value |
---|---|---|---|---|---|---|---|---|---|
ABCA1 | 3 | 0.806 | 0.799 | 0.760 | 0.714 | 0.760 | 0.666 | 0.479 | 0.001 |
ABCB1 | 6 | 0.633 | 0.718 | 0.635 | 0.687 | 0.667 | 0.688 | 0.691 | 0.028 |
ABCC1 | 4 | 0.701 | 0.647 | 0.630 | 0.594 | 0.610 | 0.648 | 0.558 | 0.001 |
ABCC2 | 7 | 0.780 | 0.701 | 0.821 | 0.796 | 0.820 | 0.828 | 0.797 | 0.070 |
ABCC4 | 4 | 0.679 | 0.698 | 0.648 | 0.674 | 0.713 | 0.723 | 0.657 | 0.144 |
ABCG2 | 4 | 0.765 | 0.776 | 0.655 | 0.644 | 0.665 | 0.622 | 0.531 | 0.001 |
CYP1A2 | 3 | 0.676 | 0.701 | 0.676 | 0.665 | 0.706 | 0.626 | 0.501 | 0.001 |
CYP2C8 | 3 | 0.479 | 0.452 | 0.418 | 0.510 | 0.475 | 0.567 | 0.494 | 0.082 |
CYP39A1 | 3 | 0.364 | 0.490 | 0.390 | 0.485 | 0.617 | 0.690 | 0.530 | 0.001 |
NAT2 | 3 | 0.353 | 0.476 | 0.552 | 0.552 | 0.689 | 0.701 | 0.690 | 0.001 |
SLC10A2 | 3 | 0.793 | 0.719 | 0.799 | 0.808 | 0.776 | 0.761 | 0.740 | 0.001 |
SLC22A14 | 3 | 0.478 | 0.442 | 0.347 | 0.445 | 0.489 | 0.408 | 0.418 | 0.104 |
SLCO1B1 | 4 | 0.620 | 0.459 | 0.440 | 0.558 | 0.421 | 0.424 | 0.501 | 0.000 |
UGT1A10 | 3 | 0.425 | 0.453 | 0.381 | 0.535 | 0.536 | 0.530 | 0.495 | 0.070 |
UGT1A6 | 3 | 0.425 | 0.453 | 0.381 | 0.535 | 0.536 | 0.530 | 0.495 | 0.024 |
UGT1A7 | 3 | 0.425 | 0.453 | 0.381 | 0.535 | 0.536 | 0.530 | 0.495 | 0.018 |
UGT1A8 | 3 | 0.425 | 0.453 | 0.381 | 0.535 | 0.536 | 0.530 | 0.495 | 0.024 |
UGT1A9 | 3 | 0.425 | 0.453 | 0.381 | 0.535 | 0.536 | 0.530 | 0.495 | 0.028 |
HUI, Hui; KGZ, Kirgiz; KZK, Kazakh; TJK, Tajik; UIG, Uyghur.