Cohort | Minor allele (frequency) | Hardy–Weinberg p value | Informative family number* | Z (p value) |
The T1DGC RR2 cohort | ||||
rs17574546 | C (0.225) | 0.931 | 302 | 2.93 (p = 3.41×10−3) |
The Canadian cohort and extra T1DGC samples† | ||||
rs7171171 | G (0.207) | 0.873 | 665 | 3.93 (p = 8.40×10−5) |
Combined analysis | − (0.209) | 1.000 | 967 | 4.84 (p = 1.30×10−6) |
*Number of families informative for (with a non-zero contribution to) the Family Based Association Test (FBAT) analysis; †no redundant sample with the Type 1 Diabetes Genetics Consortium Rapid Response 2 (T1DGC RR2) cohort.