Table 2 Details of 51 samples included in the test set and the results of MS-MLPA analysis
Sample ID11p15 statusMS-MLPAConfirmed by
Copy numberMI at H19 DMRMI at KvDMR1
TEST01-24NormalNormalNormalNormalNA
TEST25Paternal duplication 11p15Duplication all 11p15 probesHMLOMTelomere MLPA
TEST 26H19 DMR microdeletionDeletion probes ICR 2–4HMNormalSequencing
TEST27Isolated H19 DMR hypermethylationNormalHMNormalCoBRA, Pyrosequencing
TEST28Isolated H19 DMR hypermethylationNormalHMNormalPyrosequencing
TEST29Isolated H19 DMR hypermethylationNormalHMNormalPyrosequencing
TEST30Isolated H19 DMR hypermethylationNormalHMNormalPyrosequencing
TEST31Isolated H19 DMR LOMNormalLOMNormalPyrosequencing
TEST32Isolated H19 DMR LOMNormalLOMNormalPyrosequencing
TEST33Isolated H19 DMR LOMNormalLOMNormalPyrosequencing
TEST34Isolated KvDMR1 LOMNormalNormalLOMCoBRA, Pyrosequencing
TEST35Isolated KvDMR1 LOMNormalNormalLOMCoBRA, Pyrosequencing
TEST36Isolated KvDMR1 LOMNormalNormalLOMCoBRA, Pyrosequencing
TEST37Isolated KvDMR1 LOMNormalNormalLOMCoBRA, Pyrosequencing
TEST38Isolated KvDMR1 LOMNormalNormalLOMPyrosequencing, Southern
TEST39Isolated KvDMR1 LOMNormalNormalLOMCoBRA, Pyrosequencing
TEST40Isolated KvDMR1 LOMNormalNormalLOMCoBRA, Pyrosequencing
TEST41Paternal UPD 11p15NormalHMLOMMicrosatellite analysis
TEST42Paternal UPD 11p15NormalHMLOMMicrosatellite analysis
TEST43Paternal UPD 11p15NormalHMLOMMicrosatellite analysis
TEST44Paternal UPD 11p15NormalHMLOMMicrosatellite analysis
TEST45Paternal UPD 11p15NormalHMLOMMicrosatellite analysis
TEST46Paternal UPD 11p15NormalHMLOMMicrosatellite analysis
TEST47Paternal UPD 11p15NormalHMLOMMicrosatellite analysis
TEST48Paternal UPD 11p15NormalHMLOMMicrosatellite analysis
TEST49Paternal UPD 11p15NormalHMLOMMicrosatellite analysis
TEST50Paternal UPD 11p15NormalHMLOMMicrosatellite analysis
TEST51Paternal UPD 11p15NormalHMBorderline LOMMicrosatellite analysis
  • CoBRA, combined bisulfite restriction analysis; DMR, differentially methylated region; HM, hypermethylation; LOM, loss of methylation; MI, methylation index; MS-MLPA, methylation-specific multiplex-dependent ligation probe amplification; NA, not applicable; UPD, uniparental disomy.