Table 2 Quantitative real-time PCR results*
Patient noExonSample†Non-deleted controls‡Deleted controls§
MeanMinMaxMeanMinMaxMean
17530.700.961.031.000.690.720.70
4a0.460.861.140.990.440.530.50
11330.550.961.031.000.690.720.70
4a0.260.861.140.990.440.530.50
344a0.440.861.140.990.440.530.50
20130.580.961.031.000.690.720.70
4a0.370.861.140.990.440.530.50
6110a0.680.810.950.890.640.680.67
150.320.851.000.950.440.560.49
7210a0.650.891.050.980.640.680.67
117110.690.890.970.930.670.700.69
18220.480.840.920.870.490.550.51
23.10.490.871.090.960.470.530.49
131260.430.871.201.010.440.530.47
27a0.570.830.940.890.470.570.51
227340.650.951.020.970.640.690.66
307OMG0.570.920.990.950.490.560.53
300.560.940.960.950.520.580.56
16350.600.880.960.920.590.650.61
190350.330.880.960.920.590.650.61
360.550.741.200.900.540.590.56
196360.550.741.200.900.540.590.56
  • Min, minimum; Max, maximum.

  • *Results for unknown NF1 samples, non-deleted negative controls, and deleted positive controls are expressed in N-fold changes in NF1 gene copies, normalised to ZNF80 relative to the copy number of the NF1 gene in the calibrator, according to the following equation: amount of target  = 2−ΔΔCt.34

  • The ΔΔCt calculation used for the relative quantification of target was as follows: ΔΔCt  =  (Ct, target NF1 exon – Ct, ZNF80)χ–(Ct, target NF1 exon–Ct, ZNF80)y, where χ  = unknown NF1 sample (†), nondeleted negative control (‡) or deleted positive control (§), and y  =  calibrator.