Primer pairs for amplicons used for quantitative PCR. Position of amplicons in Mb refers to UCSC
| Name | Nucleotide sequence | Position | ||
|---|---|---|---|---|
| Test amplicons | ||||
| L1CAM int1 F | TCGGGAGGTATTTGACCACG | 151 608 | ||
| L1CAM int1 R | AACACCATCACGGTAACACCC | |||
| LCA10 int1 F | CCTTGAAGCGCTGATTGTCC | 151 618 | ||
| LCA10 int1 R | TCCCTGGTTTGCTACACCG | |||
| AVPR2 int1 F | GTGGGCAGAGTGGGTTTGAC | 151 639 | ||
| AVPR2 int1 R | CTCATTGGCAGCCTGGAGAG | |||
| HCFC ex17 F | TCTGATCACGGCACCTAGTGG | 151 689 | ||
| HCFC ex17 R | TCGGCGATGGTAACTGTGG | |||
| IRAK1 int9 F | CAGCCAGTAATTGCTTCACTGC | 151 749 | ||
| IRAK1 int9 R | CTGAATCCTGACGGAGACCC | |||
| Rett ex4 F1 | AGACGGTCAGCATCGAGGTC | 151 764 | ||
| Rett ex4 R1 | CCTTTCCCGCTCTTCTCACC | |||
| Rett ex4 F2 | TTCACGGTAACTGGGAGAGGG | 151 765 | ||
| Rett ex4 R2 | TGCCAGTTCCTGGAGCTTTG | |||
| Rett ex3 F | ATGTATGATGACCCCACCCTG | 151 766 | ||
| Rett ex3 R | AGCGGCCAGATTTCCTTTG | |||
| XQ3273 F | TTGGCCACTGAGAAACCCTC | 151 848 | ||
| XQ3273 R | CGGAGAGCAGGACCAGGTAG | |||
| TKTL ex12 F | GAATTCCCTTCGCTGTTTGC | 152 027 | ||
| TKTL ex12 R | GGAGGCTCTCATCACAAGCAG | |||
| FLNA 3′F | TCAGCTTTCTCGCCACATCC | 152 044 | ||
| FLNA 3′R | TCAGAAGGTCTGGGTTTGACG | |||
| FLNA int29 F | ACAGGCATGGAGGGTCACC | 152 053 | ||
| FLNA int 29 R | TGCCGCAAAACTCTAGCCAC | |||
| FLNA int25 F2 | ATGGGACTGGTCACTGAGCAG | 152 055 | ||
| FLNA int25 R2 | TCTGGCACGAAAGACACCC | |||
| FLNA ex21 F | GCTCGAGTGCTTGGACAATG | 152 057 | ||
| FLNA ex21 R | GGGTGTCAGCGAAGAGGATG | |||
| FLNA exInt18 F | CTGTCCAGCAGGTAGCCACAC | 152 058 | ||
| FLNA exInt18 R | AGAAAGTCCCTCGGAGCTGTC | |||
| FLNA int14 F | TCAAGTGGTTGTGGCACACC | 152 060 | ||
| FLNA int14 R | GCAAAGCCACAGCAGAAAGC | |||
| FLNA int8 F2 | CTCACGCTTTCACCTTCGG | 152 062 | ||
| FLNA int8 R2 | AGTACCGTTGACCCTGTGGG | |||
| FLNA int1 F | CACGCAGGAGTTGGTTGGTAG | 152 066 | ||
| FLNA int1 R | GAGAACGAATTGGGCTGCTG | |||
| EMD 3′UTR F | CATGCACGCTACCAGCAGTC | 152 078 | ||
| EMD 3′UTR R | AGAATGATGTGCCAGAGACGC | |||
| Reference amplicons | ||||
| PMP22 ex3 F | GCCACCATGATCCTGTCGAT | 17p11.2 | ||
| PMP22 ex3 R | CCCTTGGTGAGGGTGAAGAGT | |||
| ALB ex12 F | AATGCTGCACAGAATCCTTGGT | 4q11–q13 | ||
| ALB ex12 R | TCATCGACTTCCAGAGCTGAAA | |||