Properties of the arrayed BAC clones
| No* | BAC ID | Accession | Interval | Duplication content† | No of duplications | Inter v Intra (No)‡ | Similarity§ | Genic/duplicon content¶ |
|---|---|---|---|---|---|---|---|---|
| Interchromsomal duplicons shown in bold font. | ||||||||
| *Array BAC clones are numbered in order of map position along chromosome 15, proximal to distal. | ||||||||
| †Duplication content is presented as the per cent of duplicated bases in each accession. | ||||||||
| ‡HERC2 and LCR15 duplicons are considered predominantly intrachromosomal for this analysis. | ||||||||
| §The average sequence similarity of all duplicons in each accession. | ||||||||
| ¶Genic content associated with the duplications is indicated, if no genic content was identified, the chromosomal origin of the duplication is noted. | ||||||||
| NR, not reported (owing to the discordance between sequence analysis and experimental data for this accession). | ||||||||
| 1 | RP11-21916 | AC068962 | CEN-BP1 | NR | NR | NR | NR | NR |
| 2 | RP11-509A17 | AC026495 | CEN-BP1 | 100% | 4 | Inter (3) and Intra (1) | 97–99% | IgV Lambda (Chr 21), Chr 17 duplicon, CHK2 (Chr 2) HERC2 |
| 3 | RP11-26F2 | AC011767 | BP1-BP2 | 35.23% | 3 | Inter (1) and Intra (2) | 90–98% | PDCD6IP (Chr 3) HERC2, LCR15 |
| 4 | Rp11-289D12 | AC090764 | fsBP1-BP2 | Unique | – | – | – | – |
| 5 | Rp113024 | AC016033 | BP2 | 100% | 5 | Inter (2) and Intra (3) | 93–99% | PARN (Chr 16) NNARB4,ABCB10 (Chr 1) HERC2, LCR15 (3 copies) |
| 6 | Rp11-262I11 | AC100754 | BP2-BP3 | 12.19% | 1 | Inter | 93% | E-FABP pseudogene (Chr 13) |
| 7 | RP11-484P15 | AC021439 | BP2-BP3 | Unique | – | – | – | – |
| 8 | RP11-385H1 | AC019904 | BP2-BP3 | Unique | – | – | – | – |
| 9 | RP11-131I21 | AC009696 | BP2-BP3 | Unique | – | – | – | – |
| 10 | RP11-10K20 | AC011224 | BP2-BP3 | Unique | – | – | – | – |
| 11 | RP11-30G8 | AC021979 | BP2-BP3 | Unique | – | – | – | – |
| 12 | RP11322N14- | AC017046 | BP2-BP3 | Unique | – | – | – | – |
| 13 | RP11-483E23 | AC091304 | BP3 | 97.70% | 5 | Inter (2) and Intra (3) | 92–99% | HERC2, NNARB4, LCR15, Chr 13 duplicon, IgV Lambda (Chr 21) |
| 14 | RP11-37J13 | AC061965 | BP3-BP4 | 3.66% | 1 | Inter | 95% | PC326 (Chr 1) |
| 15 | RP11-360J18 | AC069382 | BP3-BP4 | Unique | – | – | – | – |
| 16 | RP11-348B17 | AC009562 | BP3-BP4 | Unique | – | – | – | – |
| 17 | RP11-540B6 | AC087481 | BP3-BP4 | 24.14% | 1 | Intra | 95–98% | HERC2 |
| 18 | RP11-88O16 | AC090982 | BP4-TEL | Unique | – | – | – | – |