CAPN10
| | | | | |
UCSNP-19 | 2 or 3 repeats of | F-GTTTGGTTCTCTTCAGCGTGGAG | 94°C 30 s | 1.5 | |
(Nancy Cox: | a 32 bp unit | R-ATGAACCCTGGCAGGGTCTAAG | 60°C 40 s | | |
pers. comm.) | | | 72°C 40 s | | |
UCSNP-43 | G→A | F-CACGCTTGCTGTGAAGTAATGC | 94°C 45 s | 1.5 | NsiI |
(Nancy Cox: | | R-CTCTGATTCCCATGGTCTGTAG | 55°C 45 s | | |
pers. comm.) | | | 72°C 60 s | | |
UCSNP-44 | C→T | F-CAGGGCGCTCACGCTTGCCG | 94°C 45 s | 2.0 | BstUI |
(Nancy Cox: | | R-TCCTCACCAAGTCAAGGCTTA | 61°C 45 s | | |
pers. comm.) | | | 72°C 45 s | | |
UCSNP-63 | C→T | F-AGGGCCTGACGGGGGTGGCG | 94°C 60 s | 3.0 | HhaI |
(Nancy Cox: | | R-AGCACTCCCAGCTCCTGATC | 66.5°C 60 s | | |
pers. comm.) | | | 72°C 60 s | | |
GNB3
| | | | | |
GNB3-C825T | C→T | F-CATCATCTGCGGCATCAC | 94°C 30 s | 1.5 | BseDI |
NCBI rs5443 | | R-AATAGTAGGCGGCCACTGAG | 58°C 30 s | | |
| | | 72°C 30 s | | |
PPARG
| | | | | |
PPARG-Pro12Ala | G→C | F-CAAACCCCTATTCCATGCTG | 94°C 30 s | 2.5 | HpaII |
NCBI rs1801282 | | R-AGTGAAGGAATCGCTTTCCG | 58°C 30 s | | |
| | | 72°C 30 s | | |
PPARG-E6 | C→T | F-CTCAGACAGATTGTCACGGAAC | 94°C 30 s | 1.5 | NlaIII |
NCBI rs3856806 | | R-TTCTTGATCACCTGCAGTAGC | 60°C 30 s | | |
| | | 72°C 30 s | | |
ABCC8 (SUR1)
| | | | | |
ABCC8-E16 splice acceptor site | C→T | F-GTAATGGTTGTTCAGACTCC | 94°C 30 s | 2.5 | PstI |
NCBI rs1799854 | | R-CTAGAAGGAGCGAGGACT | 57°C 30 s | | |
| | | 72°C 30 s | | |
ABCC8-E31 | G→A | F-GGAGTACATCGGTGCATGTG | 94°C 30 s | 1.5 | BslI |
NCBI rs4148643 | | R-CCATTAGGGGGTAGGTAAGG | 56°C 30 s | | |
| | | 72°C 30 s | | |
ABCC8-E33 | G→T | F-GCTACGACAGCTCCCTGAAG | 94°C 30 s | 2.0 | MwoI |
NCBI rs757110 | | R-CCCGTGCTCTGACCTTCT | 58°C 30 s | | |
| | | 72°C 30 s | | |
KCNJ11
| | | | | |
KCNJ11-E23K | G→A | F-ATCATCCCCGAGGAATACG | 94°C 30 s | 2.5 | BanII |
NCBI rs5219 | | R-GCCTTTCTTGGACACAAGGC | 58°C 30 s | | |
| | | 72°C 30 s | | |