CDSN chromosomes occurring with >2% frequency; haplotype alignment
5′ region | Coding | 3′UTR | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
−712 | −646 | −461 | −31 | −22 | 9 | 442 | 619 | 1215 | 1236 | 1243 | 1593 | 1606 | 1675 | 1739 | 1747 | |
*Allele number according to the classification of CDSN coding haplotypes proposed by Guerrin et al.27 | ||||||||||||||||
I (Allele 1.11)* | c | t | t | a | c | c | g (Ser) | t (Phe) | a (Ser) | t (Ser) | c (Ser) | g (Asp) | … | g | t | t |
II (Allele 1.21) | c | t | t | a | c | c | g (Ser) | t (Phe) | g (Gly) | t (Ser) | c (Ser) | g (Asp) | … | g | t | t |
III (Allele 1.4) | c | t | t | a | c | c | g (Ser) | c (Ser) | a (Ser) | t (Ser) | c (Ser) | g (Asp) | . . . | g | t | t |
IV (Allele 2.11) | t | g | c | a | c | t | g (Ser) | t (Phe) | a (Ser) | t (Ser) | t (Leu) | g (Asp) | aag | t | c | c |
V (Allele 2.2) | c | a | t | g | t | t | a (Asn) | t (Phe) | a (Ser) | t (Ser) | t (Leu) | a (Asn) | aag | t | c | c |
VI (Allele 1.5) | t | g | c | a | c | t | g (Ser) | t (Phe) | a (Ser) | g (Ala) | c (Ser) | g (Asp) | . . . | t | t | t |