Table 5

A-B SNPs in Pas4 known genes. Columns are as described for table 2

				Relative position
SNP ID	GenBank	Gene Name	Type	Chr	mRNA	Alelle/codon	AA	DBA	SNP RT	Pb	Description
*See table 3.
mCV24278514	NM_013669	Snap91	UTR 5	80,912,581	855	G/A					Synaptosomal associated protein, 91
mCV24278524			UTR 5	80,912,656	780	A/G
mCV23421071	NM_025360	1200002G13Rik	UTR 3	86,317,238	768	T/C
mCV25420569	NM_011961	Plod2	UTR 3	89,191,569	2,231	C/T					Procollagen lysine, 2-oxoglutarate 5-dioxygenase 2
mCV23564270	NM_024291	Ky	UTR 3	99,085,849	4114	A/G					Kyphoscoliosis
mCV23564271			UTR 3	99,085,879	4144	G/A
mCV23586226	NM_025371	1110014J22Rik	Missense	103,062,990	533	GTT GCT	Val Ala	Y			Aminoacylase 1
mCV23592429	NM_030730	Srisnf2l-pending	UTR 3	103,313,283	4819	G/A		Y	Y		Steroid receptor-interacting SNF2 domain protein
mCV23592440			Missense	103,314,355	3747	GTC ATC	Val Ile		Y
mCV24367303	NM_010489	Hyal2	UTR 3	104,181,371	1730	T/C		Y		Y	Hyaluronidase 2
mCV22576892	NM_025903	Ifrd2	Missense	104,196,642	152	TCC CCC	Ser Pro				Interferon related developmental regulator 2
mCV22576749			Missense	104,198,775	329	GCC ACC	Ala Thr
mCV22576540	BM486632	Sema3b	UTR 3	104,207,874	2139	T/A			Y
mCV25006051	NM_011634	Traip	Missense	104,559,428	46	GCC ACC	Ala Thr				TRAF interacting protein
mCV25024853	NM_007658	Cdc25a+I154	Missense	106,607,499	384	CAC CAA	His Gln		Y		Cell division cycle 25 homologue A
mCV23789456	NM_017466	Cmkbr1l2	UTR 5	107,780,575	190	C/A					Chemokine (C-C) receptor 1-like 2
mCV23789449			UTR 5	107,780,576	189	C/T
mCV23789448			UTR 5	107,780,703	62	G/A
mCV23789447			UTR 5	107,780,748	17	A/C
mCV23303603	NM_009371	Tgfbr2	UTR 3	113,551,165	2312	T/G		Y*	N*	Y	Transforming growth factor, beta receptor II
mCV23303602			UTR 3	113,551,334	2143	C/T		Y*	N*
mCV22520381	NM_025974	3100001N19Rik	Missense	118,043,888	568	GTT GCT	Val Ala
mCV22520379			UTR 3	118,044,104	784	A/G
mCV22520373			UTR 3	118,044,148	828	T/C