Table 4

A-B SNPs in Pas3 known genes. Columns as described for table 2

				Relative position
SNP ID	GenBank ID	Gene name	Type	Chr	mRNA	Allele/codon	AA	DBA	SNP RT	Pb	Description
mCV23294255	NM_007650	Cd5	3′ UTR	8,418,081	1811	T/C		Y			CD5 antigen
mCV23294266			3′ UTR	8,418,184	1708	T/C		Y
mCV23294598			Missense	8,426,359	100	GTC ATC	Val Ile
mCV23010981	NM_025658	2210417J23Rik	Missense	9,221,967	437	GTT GCT	Val Ala
mCV24416503	NM_008139	Gnaq	3′ UTR	14,037,739	1241	T/G					Guanine nucleotide binding protein, alpha q polypeptide
mCV23044840	NM_010730	Anxa1	Missense	18,100,327	946	GAA GGA	Glu Gly				Annexin A1
mCV24486668	NM_008022	Foxd4	Missense	22,674,812	1698	CAG CGG	Gln Arg		Y		Forkhead box D4
mCV24486689			Missense	22,675,284	1226	GGG CGG	Gly Arg	Y	Y	Y
mCV22823123	NM_028785	1200017A24Rik	3′ UTR	22,988,476	2509	A/G
mCV23196871	NM_013703	Vldlr	Missense	25,022,920	1118	GGG AGG	Gly Arg				Very low density lipoprotein receptor
mCV23093281	NM_031249	Cstf2t-pending	3′ UTR	28,869,655	2056	G/C		Y			Cleavage stimulation factor, 3′ pre-RNA subunit 2
mCV23094584	NM_018830	Asah2	5′ UTR	29,849,129	306	T/G		Y			N-acylsphingosine amidohydrolase 2
mCV25400117	BB002878	Minpp1	Nonsense	30,268,848	564	TGA TGG	Stop Trp		Y		Multiple inositol polyphosphate histidine phosphatase 1
mCV25441217	NM_026487	4921525H23Rik	3′ UTR	30,455,931	1840	C/T		Y
mCV25441216			3′ UTR	30,455,946	1825	G/A		Y
mCV25441200			3′ UTR	30,456,513	1258	A/G