ESTs tested in this study and results of the PCR screening
EST | Name | Map position | Forward primer | Reverse primer | GM09189 | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|
11 | 17 | 18 | C | (PWS) | A | AM | |||||
WI-9340 | ATP synthase, H+ transporting, mitochondrial F0 complex, subunit b, isoform1 | 98-102 cM | TGAGAGAACGAAATCTCTATCGG | AGGCAGCAAGTTTTTATAAAGGC | + | + | + | + | NT | + | + |
stSG4756 | Highly similar to cerebellin precusor | 102-109 cM | TCCTTTTTGATTGCTTTGGG | AGAAGCCCACCTGAAAGTCA | + | + | + | + | NT | + | + |
stSG1384 | Hypothetical 52.9 kDa protein in CDC26-YMR31 intergenic region | 109-118 cM | CCAGTTAGTGAGGTTTTGAGGG | GGCCTCCTCTGATCTCTCG | + | + | + | + | NT | + | + |
A004F30 | Similar to probable E1-E2 ATPase | 109-118 cM | CTTGACTGTTTTTACTGAAAAG | CTGAGAATTAGACTGAAAGTTTA | − | − | − | − | NT | + | + |
SHGC-11871 | Nuclear factor of activated T cells (NF-ATc) | 117-123 cM | ATGTCCCGTTAGTGAGACCG | AAGCAGCTTTAGGGTGCAAA | + | + | + | + | NT | + | + |
hGR1/2 | Galanin receptor 1 | >123 cM | CTGGCCTACCTGCTCTTCTG | GAAGAGGCCCTGGTGGTAG | − | − | − | − | NT | + | + |
WI-9286 | Golli/myelin basic protein | >123 cM | AGGTCTCGTTCCGTGCTG | GCCACCATCCCTTGTGAG | + | + | + | + | NT | + | + |
CYT5B.A/B | Cytochrome b-5 | 18q23 | TCCATCCAGATGACAGACCA | CTGCCCATGTTATAGGCGAT | + | + | + | + | NT | + | + |
SGC32075 | Unidentified transcript | 109 cM | TATTTATTTACCACGCCTGTTTC | CCTGTGTCAGAAGAGCACAA | + | + | + | + | NT | + | + |
WI-6843 | Unidentified transcript | 109 cM | ACATGGTGTAACATTTCCAATAACA | TGGACTCGCTACTCCGTTCT | + | + | + | + | + | + | + |
IB2403 | Unidentified transcript | 102-109 cM | TGGCATAGAAAAGGGTAAAA | GGCAGCTCTCCAGAAGTAAT | + | + | + | + | NT | + | + |
WI-15273 | Unidentified transcript | 109-117 cM | TCCTGTTGCTCCCAGTCC | TGGGAGATCAAGAGTCCTCG | − | − | − | − | NT | + | + |
H81050 | Unidentified transcript | 109-118 cM | TTTGACACTACCAGGTTCTATGAC | GGGCACACTACTCAGAGACATT | + | + | + | + | + | + | + |
stSG3734 | Unidentified transcript | 109-118 cM | TCAACTTATGTGTGCTGCTGG | TACCCAAGAACGTGTGGTGA | − | − | − | − | NT | + | + |
stSG2738 | Unidentified transcript | 109-118 cM | CGTCGACCCCAGTTTTTG | AGTGCGTGCTTTGTCCATC | − | − | − | − | NT | + | + |
SGC32005 | Unidentified transcript | 118-123 cM | GCAATCGGCGACAGTTTAAT | TGAATGTCTGAGTGAGGGTCC | + | + | + | + | NT | + | + |
Cda0ea07 | Unidentified transcript | 118-123 cM | CTGTCCTTGGTCTGTTAAACTG | TGATGGTAATTGCCTGTGGTG | + | + | + | + | NT | + | + |
A004B28 | Unidentified transcript | 123-124 cM | CCTAAAATTATGAATAGCACAC | GAAGGAAGGTTATATTTCTTATC | − | − | − | − | NT | + | + |
A007H41 | Unidentified transcript | 123-124 cM | CTCTCTGAGCTTCAGTTTC | TCTTCCCATAAATGACAG | − | − | − | − | NT | + | + |
SGC31888 | Unidentified transcript | 123-124 cM | GAGTTTAATTGAGCAAAGAATGATT | GCTGTTTGCAGGCCTCAC | + | + | + | + | NT | + | + |
SGC30781 | Unidentified transcript | 123-124 cM | AAAGTTGTCGCACTGAATAAGAG | GACAAGTGAACAAGATCAATTTTTT | − | − | − | − | NT | + | + |
WI-15059 | Unidentified transcript | 123-124 cM | CTCTCCTAGGGGGTGATGC | GCGAGCCCGTTAGTGATG | − | − | − | − | NT | + | + |
11 = cDNA derived from a lymphoblastoid cell line of patient 11 with a paternal deletion. 17 and 18 = cDNAs derived from lymphoblastoid cell lines of patients 17 and 18 with a maternal and a paternal deletion, respectively.1 C = control cDNA derived from a lymphoblastoid cell line of a person with a normal chromosome 18. A and AM = genomic DNA of normal subjects. NT = not tested.