RT Journal Article SR Electronic T1 X-linked variations in SHROOM4 are implicated in congenital anomalies of the urinary tract and the anorectal, cardiovascular and central nervous systems JF Journal of Medical Genetics JO J Med Genet FD BMJ Publishing Group Ltd SP jmedgenet-2022-108738 DO 10.1136/jmg-2022-108738 A1 Kolvenbach, Caroline M A1 Felger, Tim A1 Schierbaum, Luca A1 Thiffault, Isabelle A1 Pastinen, Tomi A1 Szczepańska, Maria A1 Zaniew, Marcin A1 Adamczyk, Piotr A1 Bayat, Allan A1 Yilmaz, Öznur A1 Lindenberg, Tobias T A1 Thiele, Holger A1 Hildebrandt, Friedhelm A1 Hinderhofer, Katrin A1 Moog, Ute A1 Hilger, Alina C A1 Sullivan, Bonnie A1 Bartik, Lauren A1 Gnyś, Piotr A1 Grote, Phillip A1 Odermatt, Benjamin A1 Reutter, Heiko M A1 Dworschak, Gabriel C YR 2022 UL http://jmg.bmj.com/content/early/2022/11/15/jmg-2022-108738.abstract AB Background SHROOM4 is thought to play an important role in cytoskeletal modification and development of the early nervous system. Previously, single-nucleotide variants (SNVs) or copy number variations (CNVs) in SHROOM4 have been associated with the neurodevelopmental disorder Stocco dos Santos syndrome, but not with congenital anomalies of the urinary tract and the visceral or the cardiovascular system.Methods Here, exome sequencing and CNV analyses besides expression studies in zebrafish and mouse and knockdown (KD) experiments using a splice blocking morpholino in zebrafish were performed to study the role of SHROOM4 during embryonic development.Results In this study, we identified putative disease-causing SNVs and CNVs in SHROOM4 in six individuals from four families with congenital anomalies of the urinary tract and the anorectal, cardiovascular and central nervous systems (CNS). Embryonic mouse and zebrafish expression studies showed Shroom4 expression in the upper and lower urinary tract, the developing cloaca, the heart and the cerebral CNS. KD studies in zebrafish larvae revealed pronephric cysts, anomalies of the cloaca and the heart, decreased eye-to-head ratio and higher mortality compared with controls. These phenotypes could be rescued by co-injection of human wild-type SHROOM4 mRNA and morpholino.Conclusion The identified SNVs and CNVs in affected individuals with congenital anomalies of the urinary tract, the anorectal, the cardiovascular and the central nervous systems, and subsequent embryonic mouse and zebrafish studies suggest SHROOM4 as a developmental gene for different organ systems.Data are available upon reasonable request. All data relevant to the study are included in the article or uploaded as supplementary information. SHROOM4 variants identified in this study were submitted to ClinVar.