Transcription regulation by distal enhancers: who's in the loop?
R Stadhouders, A van den Heuvel, P Kolovos… - …, 2012 - Taylor & Francis
Genome-wide chromatin profiling efforts have shown that enhancers are often located at
large distances from gene promoters within the noncoding genome. Whereas enhancers …
large distances from gene promoters within the noncoding genome. Whereas enhancers …
Multiplexed chromosome conformation capture sequencing for rapid genome-scale high-resolution detection of long-range chromatin interactions
Chromosome conformation capture (3C) technology is a powerful and increasingly popular
tool for analyzing the spatial organization of genomes. Several 3C variants have been …
tool for analyzing the spatial organization of genomes. Several 3C variants have been …
Dynamic long‐range chromatin interactions control Myb proto‐oncogene transcription during erythroid development
R Stadhouders, S Thongjuea, C Andrieu‐Soler… - The EMBO …, 2012 - embopress.org
The key haematopoietic regulator Myb is essential for coordinating proliferation and
differentiation. ChIP‐Sequencing and Chromosome Conformation Capture (3C) …
differentiation. ChIP‐Sequencing and Chromosome Conformation Capture (3C) …
Single-cell RNA sequencing in facioscapulohumeral muscular dystrophy disease etiology and development
Facioscapulohumeral muscular dystrophy (FSHD) is characterized by sporadic de-
repression of the transcription factor DUX4 in skeletal muscle. DUX4 activates a cascade of …
repression of the transcription factor DUX4 in skeletal muscle. DUX4 activates a cascade of …
[HTML][HTML] TRIM33 switches off Ifnb1 gene transcription during the late phase of macrophage activation
F Ferri, A Parcelier, V Petit, AS Gallouet… - Nature …, 2015 - nature.com
Despite its importance during viral or bacterial infections, transcriptional regulation of the
interferon-β gene (Ifnb1) in activated macrophages is only partially understood. Here we …
interferon-β gene (Ifnb1) in activated macrophages is only partially understood. Here we …
[HTML][HTML] Facioscapulohumeral dystrophy transcriptome signatures correlate with different stages of disease and are marked by different MRI biomarkers
A van den Heuvel, S Lassche, K Mul, A Greco… - Scientific Reports, 2022 - nature.com
With several therapeutic strategies for facioscapulohumeral muscular dystrophy (FSHD)
entering clinical testing, outcome measures are becoming increasingly important …
entering clinical testing, outcome measures are becoming increasingly important …
[HTML][HTML] Multiscale 3D-printing of microfluidic AFM cantilevers
RCLN Kramer, EJ Verlinden, L Angeloni… - Lab on a Chip, 2020 - pubs.rsc.org
Microfluidic atomic force microscopy (AFM) cantilever probes have all the functionalities of a
standard AFM cantilever along with fluid pipetting. They have a channel inside the cantilever …
standard AFM cantilever along with fluid pipetting. They have a channel inside the cantilever …
[HTML][HTML] Systemic delivery of a DUX4-targeting antisense oligonucleotide to treat facioscapulohumeral muscular dystrophy
LF Bouwman, B den Hamer, A van den Heuvel… - … Therapy-Nucleic Acids, 2021 - cell.com
Facioscapulohumeral muscular dystrophy (FSHD) is one of the most prevalent skeletal
muscle dystrophies. Skeletal muscle pathology in individuals with FSHD is caused by …
muscle dystrophies. Skeletal muscle pathology in individuals with FSHD is caused by …
The SCL/TAL1 transcription factor represses the stress protein DDiT4/REDD1 in human hematopoietic stem/progenitor cells
A Benyoucef, J Calvo, L Renou, ML Arcangeli… - Stem Cells, 2015 - academic.oup.com
Hematopoietic stem/progenitor cells (HSPCs) are regulated through numerous molecular
mechanisms that have not been interconnected. The transcription factor stem cell …
mechanisms that have not been interconnected. The transcription factor stem cell …
Long-range gene regulation and novel therapeutic applications
A van den Heuvel, R Stadhouders… - Blood, The Journal …, 2015 - ashpublications.org
An intimate relationship exists between nuclear architecture and gene activity. Unraveling
the fine-scale three-dimensional structure of the genome and its impact on gene regulation …
the fine-scale three-dimensional structure of the genome and its impact on gene regulation …