Evidence that caspase-13 is not a human but a bovine gene

Biochem Biophys Res Commun. 2001 Aug 3;285(5):1150-4. doi: 10.1006/bbrc.2001.5315.

Abstract

Caspase-13 was reported to be a member of the human caspase family of proteases (Humke, E., et al., J. Biol. Chem. 273, 15702-15707, 1998). By contrast, a recent study (Lin, X., et al., J. Biol. Chem. 275, 39920-39926, 2000) could not confirm caspase-13 expression in human tissues. When we searched the GenBank database we found several expressed sequence tags (ESTs) from bos taurus completely matching the published caspase-13 sequence. Reverse transcription polymerase chain reaction (RT-PCR) analysis revealed that bovine but not human peripheral blood mononuclear cells express caspase-13. From these cells we cloned two bovine caspase-13 splice variants and found that the sequence of the larger variant was identical to the mRNA published by Humke et al. Our findings strongly suggest that the previously published caspase-13 sequence is not of human origin but represents a bovine gene.

MeSH terms

  • Alternative Splicing
  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Caspases / genetics*
  • Cattle
  • Cloning, Molecular
  • DNA, Complementary / genetics
  • DNA, Complementary / isolation & purification
  • Expressed Sequence Tags
  • Humans
  • Isoenzymes / genetics
  • Leukocytes, Mononuclear / chemistry
  • Molecular Sequence Data
  • RNA, Messenger / genetics
  • Reproducibility of Results
  • Reverse Transcriptase Polymerase Chain Reaction
  • Sequence Analysis, DNA
  • Sequence Homology
  • Species Specificity

Substances

  • DNA, Complementary
  • Isoenzymes
  • RNA, Messenger
  • Caspases
  • caspase 13

Associated data

  • GENBANK/AF383946
  • GENBANK/AF383947