STAT6 polymorphisms, dbSNP accession number, localisation, allele frequency, call rates, and genotyping primers
| SNP ID* | Location | Call rate | Allele | Allele frequency | Direction | PCR primer | Extension primer |
|---|---|---|---|---|---|---|---|
| *SNP no. according to dbSNP (www.ncbi.nlm.nih.gov/SNP). | |||||||
| rs2598483 | 5′flanking | 95.5 | G | 0.90 | F | ACGTTGGATGTACTGTCTGTGGATGTCTGC | CACGTGCTTTGTATGTGCTCC |
| A | 0.10 | R | ACGTTGGATGTGTGCACATACGTGTTCACG | ||||
| rs3001428 | 5′flanking | 96.4 | C | 0.95 | F | ACGTTGGATGTGATTTCCAGAACCAGCTCC | CCACACACGTGCACTCATG |
| T | 0.05 | R | ACGTTGGATGTTCAAACCCTCTGCTGCCTG | ||||
| rs324011 | Intron 2 | 91.3 | C | 0.62 | F | ACGTTGGATGGATGCCCCTGGTTTAAGGTG | ATAGCCCTCCTAGGGAC |
| T | 0.38 | R | ACGTTGGATGCAGGGACCTCCCATAGATAG | ||||
| rs3024974 | Intron 18 | 95.5 | C | 0.89 | F | ACGTTGGATGTGACTGACCAAGGGTTGATG | GGGCTTAGTGCTTATCTG |
| T | 0.11 | R | ACGTTGGATGAAGGTGAGTGTGGTGGTATG | ||||
| rs1059513 | 3′UTR | 96.2 | A | 0.88 | F | ACGTTGGATGAATTCCTGTTAGCCAGGTGG | ACGAAGAATCTCAGCCCT |
| G | 0.12 | R | ACGTTGGATGCGTTCACACAGCTATACACG | ||||
| rs4559 | 3′UTR | 95.2 | A | 0.63 | F | ACGTTGGATGTGAACGTGTATGTACCTAGG | GCAACTAAGGTGCCAGCTATA |
| G | 0.37 | R | ACGTTGGATGTAGCATATGTCAGAGAGGCC | ||||