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J Med Genet 40:399-407 doi:10.1136/jmg.40.6.399
  • Original article

Complete sequencing shows a role for MSX1 in non-syndromic cleft lip and palate

Table 2

Case-control comparison of population specific alleles

Variant name Population Allele 1 Allele 2 Chi squares (1 df) Pearson’s p value
799, 330C>T, G110G T C
Cases - Asian (CL/P + CPO) 74 410 4.356 0.0368
Controls 8 98
Cases - Asian (CPO only) 11 37 7.216 0.0072
Asian controls 8 98
4500, *(811-816)del 6bpd wt
Cases - white (CLP+CPO) 40 86 4.668 0.0307
White controls 31 121

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